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Mikkel Elle Lepperød 2019-10-09 14:24:44 +02:00
parent 3b01848f89
commit b6a4cc0b49
46 changed files with 56578 additions and 37292 deletions
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actions/waveform-analysis/attributes.yaml
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registered: '2019-10-04T10:30:30'
data:
figures: figures
statistics: statistics
notebook: 10_waveform_analysis.ipynb
html: 10_waveform_analysis.html
results: results.csv
registered: '2019-10-04T10:30:30'
data:
figures: figures
statistics: statistics
notebook: 10_waveform_analysis.ipynb
html: 10_waveform_analysis.html
results: results.csv

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,Control,Stimulated,MWU,PRS
average_firing_rate,9.53 ± 0.37 (491),10.62 ± 0.44 (462),"104995.00, 0.047","1.09, 0.053"
half_width,0.30 ± 0.00 (491),0.30 ± 0.00 (462),"116089.00, 0.530","0.00, 0.425"
peak_to_trough,0.66 ± 0.00 (491),0.67 ± 0.01 (462),"116944.00, 0.407","0.00, 0.539"
,Control,Stimulated,MWU,PRS
average_firing_rate,10.02 ± 0.37 (478),10.63 ± 0.43 (488),"112628.00, 0.356","0.61, 0.280"
half_width,0.29 ± 0.00 (478),0.30 ± 0.00 (488),"117634.00, 0.817","0.00, 0.610"
peak_to_trough,0.66 ± 0.00 (478),0.66 ± 0.01 (488),"121739.00, 0.239","0.01, 0.487"

1 Control Stimulated MWU PRS
2 average_firing_rate 9.53 ± 0.37 (491) 10.02 ± 0.37 (478) 10.62 ± 0.44 (462) 10.63 ± 0.43 (488) 104995.00, 0.047 112628.00, 0.356 1.09, 0.053 0.61, 0.280
3 half_width 0.30 ± 0.00 (491) 0.29 ± 0.00 (478) 0.30 ± 0.00 (462) 0.30 ± 0.00 (488) 116089.00, 0.530 117634.00, 0.817 0.00, 0.425 0.00, 0.610
4 peak_to_trough 0.66 ± 0.00 (491) 0.66 ± 0.00 (478) 0.67 ± 0.01 (462) 0.66 ± 0.01 (488) 116944.00, 0.407 121739.00, 0.239 0.00, 0.539 0.01, 0.487

18
actions/waveform-analysis/data/statistics/broad_spiking.tex
View File

@ -1,9 +1,9 @@
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 9.53 ± 0.37 (491) & 10.62 ± 0.44 (462) & 104995.00, 0.047 & 1.09, 0.053 \\
half\_width & 0.30 ± 0.00 (491) & 0.30 ± 0.00 (462) & 116089.00, 0.530 & 0.00, 0.425 \\
peak\_to\_trough & 0.66 ± 0.00 (491) & 0.67 ± 0.01 (462) & 116944.00, 0.407 & 0.00, 0.539 \\
\bottomrule
\end{tabular}
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 10.02 ± 0.37 (478) & 10.63 ± 0.43 (488) & 112628.00, 0.356 & 0.61, 0.280 \\
half\_width & 0.29 ± 0.00 (478) & 0.30 ± 0.00 (488) & 117634.00, 0.817 & 0.00, 0.610 \\
peak\_to\_trough & 0.66 ± 0.00 (478) & 0.66 ± 0.01 (488) & 121739.00, 0.239 & 0.01, 0.487 \\
\bottomrule
\end{tabular}

8
actions/waveform-analysis/data/statistics/broad_spiking_11.csv
View File

@ -1,4 +1,4 @@
,Control,Stimulated,MWU,PRS
average_firing_rate,9.53 ± 0.37 (491),10.04 ± 0.49 (269),"63173.00, 0.322","0.51, 0.406"
half_width,0.30 ± 0.00 (491),0.30 ± 0.00 (269),"67834.00, 0.535","0.00, 0.655"
peak_to_trough,0.66 ± 0.00 (491),0.67 ± 0.01 (269),"66266.00, 0.938","0.01, 0.279"
,Control,Stimulated,MWU,PRS
average_firing_rate,10.02 ± 0.37 (478),10.15 ± 0.47 (294),"69504.00, 0.800","0.13, 0.832"
half_width,0.29 ± 0.00 (478),0.30 ± 0.00 (294),"71749.00, 0.622","0.00, 0.563"
peak_to_trough,0.66 ± 0.00 (478),0.67 ± 0.01 (294),"72358.50, 0.487","0.01, 0.329"

1 Control Stimulated MWU PRS
2 average_firing_rate 9.53 ± 0.37 (491) 10.02 ± 0.37 (478) 10.04 ± 0.49 (269) 10.15 ± 0.47 (294) 63173.00, 0.322 69504.00, 0.800 0.51, 0.406 0.13, 0.832
3 half_width 0.30 ± 0.00 (491) 0.29 ± 0.00 (478) 0.30 ± 0.00 (269) 0.30 ± 0.00 (294) 67834.00, 0.535 71749.00, 0.622 0.00, 0.655 0.00, 0.563
4 peak_to_trough 0.66 ± 0.00 (491) 0.66 ± 0.00 (478) 0.67 ± 0.01 (269) 0.67 ± 0.01 (294) 66266.00, 0.938 72358.50, 0.487 0.01, 0.279 0.01, 0.329

18
actions/waveform-analysis/data/statistics/broad_spiking_11.tex
View File

@ -1,9 +1,9 @@
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 9.53 ± 0.37 (491) & 10.04 ± 0.49 (269) & 63173.00, 0.322 & 0.51, 0.406 \\
half\_width & 0.30 ± 0.00 (491) & 0.30 ± 0.00 (269) & 67834.00, 0.535 & 0.00, 0.655 \\
peak\_to\_trough & 0.66 ± 0.00 (491) & 0.67 ± 0.01 (269) & 66266.00, 0.938 & 0.01, 0.279 \\
\bottomrule
\end{tabular}
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 10.02 ± 0.37 (478) & 10.15 ± 0.47 (294) & 69504.00, 0.800 & 0.13, 0.832 \\
half\_width & 0.29 ± 0.00 (478) & 0.30 ± 0.00 (294) & 71749.00, 0.622 & 0.00, 0.563 \\
peak\_to\_trough & 0.66 ± 0.00 (478) & 0.67 ± 0.01 (294) & 72358.50, 0.487 & 0.01, 0.329 \\
\bottomrule
\end{tabular}

8
actions/waveform-analysis/data/statistics/broad_spiking_30.csv
View File

@ -1,4 +1,4 @@
,Control,Stimulated,MWU,PRS
average_firing_rate,9.53 ± 0.37 (491),11.42 ± 0.81 (193),"41822.00, 0.017","1.89, 0.013"
half_width,0.30 ± 0.00 (491),0.29 ± 0.01 (193),"48255.00, 0.707","0.01, 0.384"
peak_to_trough,0.66 ± 0.00 (491),0.66 ± 0.01 (193),"50678.00, 0.156","0.00, 0.854"
,Control,Stimulated,MWU,PRS
average_firing_rate,10.02 ± 0.37 (478),11.36 ± 0.80 (194),"43124.00, 0.155","1.34, 0.085"
half_width,0.29 ± 0.00 (478),0.29 ± 0.01 (194),"45885.00, 0.833","0.00, 0.804"
peak_to_trough,0.66 ± 0.00 (478),0.66 ± 0.01 (194),"49380.50, 0.186","0.00, 0.920"

1 Control Stimulated MWU PRS
2 average_firing_rate 9.53 ± 0.37 (491) 10.02 ± 0.37 (478) 11.42 ± 0.81 (193) 11.36 ± 0.80 (194) 41822.00, 0.017 43124.00, 0.155 1.89, 0.013 1.34, 0.085
3 half_width 0.30 ± 0.00 (491) 0.29 ± 0.00 (478) 0.29 ± 0.01 (193) 0.29 ± 0.01 (194) 48255.00, 0.707 45885.00, 0.833 0.01, 0.384 0.00, 0.804
4 peak_to_trough 0.66 ± 0.00 (491) 0.66 ± 0.00 (478) 0.66 ± 0.01 (193) 0.66 ± 0.01 (194) 50678.00, 0.156 49380.50, 0.186 0.00, 0.854 0.00, 0.920

18
actions/waveform-analysis/data/statistics/broad_spiking_30.tex
View File

@ -1,9 +1,9 @@
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 9.53 ± 0.37 (491) & 11.42 ± 0.81 (193) & 41822.00, 0.017 & 1.89, 0.013 \\
half\_width & 0.30 ± 0.00 (491) & 0.29 ± 0.01 (193) & 48255.00, 0.707 & 0.01, 0.384 \\
peak\_to\_trough & 0.66 ± 0.00 (491) & 0.66 ± 0.01 (193) & 50678.00, 0.156 & 0.00, 0.854 \\
\bottomrule
\end{tabular}
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 10.02 ± 0.37 (478) & 11.36 ± 0.80 (194) & 43124.00, 0.155 & 1.34, 0.085 \\
half\_width & 0.29 ± 0.00 (478) & 0.29 ± 0.01 (194) & 45885.00, 0.833 & 0.00, 0.804 \\
peak\_to\_trough & 0.66 ± 0.00 (478) & 0.66 ± 0.01 (194) & 49380.50, 0.186 & 0.00, 0.920 \\
\bottomrule
\end{tabular}

8
actions/waveform-analysis/data/statistics/narrow_spiking.csv
View File

@ -1,4 +1,4 @@
,Control,Stimulated,MWU,PRS
average_firing_rate,21.22 ± 1.17 (147),20.20 ± 0.96 (178),"13472.00, 0.645","1.02, 0.494"
half_width,0.23 ± 0.01 (147),0.23 ± 0.00 (178),"12839.00, 0.773","0.01, 0.456"
peak_to_trough,0.29 ± 0.00 (147),0.29 ± 0.00 (178),"13194.50, 0.895","0.00, 0.892"
,Control,Stimulated,MWU,PRS
average_firing_rate,21.83 ± 1.15 (145),20.79 ± 0.92 (184),"13743.00, 0.638","1.04, 0.470"
half_width,0.23 ± 0.01 (145),0.23 ± 0.00 (184),"12714.00, 0.465","0.00, 0.720"
peak_to_trough,0.29 ± 0.00 (145),0.29 ± 0.00 (184),"13281.00, 0.946","0.00, 0.839"

1 Control Stimulated MWU PRS
2 average_firing_rate 21.22 ± 1.17 (147) 21.83 ± 1.15 (145) 20.20 ± 0.96 (178) 20.79 ± 0.92 (184) 13472.00, 0.645 13743.00, 0.638 1.02, 0.494 1.04, 0.470
3 half_width 0.23 ± 0.01 (147) 0.23 ± 0.01 (145) 0.23 ± 0.00 (178) 0.23 ± 0.00 (184) 12839.00, 0.773 12714.00, 0.465 0.01, 0.456 0.00, 0.720
4 peak_to_trough 0.29 ± 0.00 (147) 0.29 ± 0.00 (145) 0.29 ± 0.00 (178) 0.29 ± 0.00 (184) 13194.50, 0.895 13281.00, 0.946 0.00, 0.892 0.00, 0.839

18
actions/waveform-analysis/data/statistics/narrow_spiking.tex
View File

@ -1,9 +1,9 @@
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 21.22 ± 1.17 (147) & 20.20 ± 0.96 (178) & 13472.00, 0.645 & 1.02, 0.494 \\
half\_width & 0.23 ± 0.01 (147) & 0.23 ± 0.00 (178) & 12839.00, 0.773 & 0.01, 0.456 \\
peak\_to\_trough & 0.29 ± 0.00 (147) & 0.29 ± 0.00 (178) & 13194.50, 0.895 & 0.00, 0.892 \\
\bottomrule
\end{tabular}
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 21.83 ± 1.15 (145) & 20.79 ± 0.92 (184) & 13743.00, 0.638 & 1.04, 0.470 \\
half\_width & 0.23 ± 0.01 (145) & 0.23 ± 0.00 (184) & 12714.00, 0.465 & 0.00, 0.720 \\
peak\_to\_trough & 0.29 ± 0.00 (145) & 0.29 ± 0.00 (184) & 13281.00, 0.946 & 0.00, 0.839 \\
\bottomrule
\end{tabular}

8
actions/waveform-analysis/data/statistics/narrow_spiking_11.csv
View File

@ -1,4 +1,4 @@
,Control,Stimulated,MWU,PRS
average_firing_rate,21.22 ± 1.17 (147),19.13 ± 1.31 (102),"8043.00, 0.329","2.08, 0.236"
half_width,0.23 ± 0.01 (147),0.23 ± 0.00 (102),"7299.00, 0.724","0.01, 0.299"
peak_to_trough,0.29 ± 0.00 (147),0.29 ± 0.00 (102),"7471.50, 0.964","0.00, 0.814"
,Control,Stimulated,MWU,PRS
average_firing_rate,21.83 ± 1.15 (145),19.85 ± 1.22 (110),"8502.00, 0.367","1.98, 0.244"
half_width,0.23 ± 0.01 (145),0.23 ± 0.00 (110),"7419.00, 0.341","0.00, 0.547"
peak_to_trough,0.29 ± 0.00 (145),0.29 ± 0.00 (110),"7711.50, 0.652","0.00, 0.696"

1 Control Stimulated MWU PRS
2 average_firing_rate 21.22 ± 1.17 (147) 21.83 ± 1.15 (145) 19.13 ± 1.31 (102) 19.85 ± 1.22 (110) 8043.00, 0.329 8502.00, 0.367 2.08, 0.236 1.98, 0.244
3 half_width 0.23 ± 0.01 (147) 0.23 ± 0.01 (145) 0.23 ± 0.00 (102) 0.23 ± 0.00 (110) 7299.00, 0.724 7419.00, 0.341 0.01, 0.299 0.00, 0.547
4 peak_to_trough 0.29 ± 0.00 (147) 0.29 ± 0.00 (145) 0.29 ± 0.00 (102) 0.29 ± 0.00 (110) 7471.50, 0.964 7711.50, 0.652 0.00, 0.814 0.00, 0.696

18
actions/waveform-analysis/data/statistics/narrow_spiking_11.tex
View File

@ -1,9 +1,9 @@
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 21.22 ± 1.17 (147) & 19.13 ± 1.31 (102) & 8043.00, 0.329 & 2.08, 0.236 \\
half\_width & 0.23 ± 0.01 (147) & 0.23 ± 0.00 (102) & 7299.00, 0.724 & 0.01, 0.299 \\
peak\_to\_trough & 0.29 ± 0.00 (147) & 0.29 ± 0.00 (102) & 7471.50, 0.964 & 0.00, 0.814 \\
\bottomrule
\end{tabular}
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 21.83 ± 1.15 (145) & 19.85 ± 1.22 (110) & 8502.00, 0.367 & 1.98, 0.244 \\
half\_width & 0.23 ± 0.01 (145) & 0.23 ± 0.00 (110) & 7419.00, 0.341 & 0.00, 0.547 \\
peak\_to\_trough & 0.29 ± 0.00 (145) & 0.29 ± 0.00 (110) & 7711.50, 0.652 & 0.00, 0.696 \\
\bottomrule
\end{tabular}

8
actions/waveform-analysis/data/statistics/narrow_spiking_30.csv
View File

@ -1,4 +1,4 @@
,Control,Stimulated,MWU,PRS
average_firing_rate,21.22 ± 1.17 (147),21.62 ± 1.40 (76),"5429.00, 0.732","0.41, 0.822"
half_width,0.23 ± 0.01 (147),0.23 ± 0.01 (76),"5540.00, 0.921","0.00, 0.846"
peak_to_trough,0.29 ± 0.00 (147),0.29 ± 0.01 (76),"5723.00, 0.765","0.00, 0.582"
,Control,Stimulated,MWU,PRS
average_firing_rate,21.83 ± 1.15 (145),22.18 ± 1.39 (74),"5241.00, 0.781","0.35, 0.860"
half_width,0.23 ± 0.01 (145),0.23 ± 0.01 (74),"5295.00, 0.875","0.00, 0.998"
peak_to_trough,0.29 ± 0.00 (145),0.28 ± 0.00 (74),"5569.50, 0.646","0.01, 0.355"

1 Control Stimulated MWU PRS
2 average_firing_rate 21.22 ± 1.17 (147) 21.83 ± 1.15 (145) 21.62 ± 1.40 (76) 22.18 ± 1.39 (74) 5429.00, 0.732 5241.00, 0.781 0.41, 0.822 0.35, 0.860
3 half_width 0.23 ± 0.01 (147) 0.23 ± 0.01 (145) 0.23 ± 0.01 (76) 0.23 ± 0.01 (74) 5540.00, 0.921 5295.00, 0.875 0.00, 0.846 0.00, 0.998
4 peak_to_trough 0.29 ± 0.00 (147) 0.29 ± 0.00 (145) 0.29 ± 0.01 (76) 0.28 ± 0.00 (74) 5723.00, 0.765 5569.50, 0.646 0.00, 0.582 0.01, 0.355

18
actions/waveform-analysis/data/statistics/narrow_spiking_30.tex
View File

@ -1,9 +1,9 @@
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 21.22 ± 1.17 (147) & 21.62 ± 1.40 (76) & 5429.00, 0.732 & 0.41, 0.822 \\
half\_width & 0.23 ± 0.01 (147) & 0.23 ± 0.01 (76) & 5540.00, 0.921 & 0.00, 0.846 \\
peak\_to\_trough & 0.29 ± 0.00 (147) & 0.29 ± 0.01 (76) & 5723.00, 0.765 & 0.00, 0.582 \\
\bottomrule
\end{tabular}
\begin{tabular}{lllll}
\toprule
{} & Control & Stimulated & MWU & PRS \\
\midrule
average\_firing\_rate & 21.83 ± 1.15 (145) & 22.18 ± 1.39 (74) & 5241.00, 0.781 & 0.35, 0.860 \\
half\_width & 0.23 ± 0.01 (145) & 0.23 ± 0.01 (74) & 5295.00, 0.875 & 0.00, 0.998 \\
peak\_to\_trough & 0.29 ± 0.00 (145) & 0.28 ± 0.00 (74) & 5569.50, 0.646 & 0.01, 0.355 \\
\bottomrule
\end{tabular}