From f0e2895e0fd291864e7e49dd956e168f2b65665e Mon Sep 17 00:00:00 2001 From: =?UTF-8?q?Mikkel=20Elle=20Lepper=C3=B8d?= Date: Tue, 8 Oct 2019 15:50:28 +0200 Subject: [PATCH] auto commit actions/1849-110319-1 --- actions/1849-110319-1/attributes.yaml | 13 + .../Rhythm_FPGA-100.0/continuous.dat | 3 + .../Rhythm_FPGA-100.0/timestamps.npy | 3 + .../TEXT_group_1/channels.npy | 3 + .../TEXT_group_1/text.npy | 3 + .../TEXT_group_1/timestamps.npy | 3 + .../TTL_1/channel_states.npy | 3 + .../Rhythm_FPGA-100.0/TTL_1/channels.npy | 3 + .../Rhythm_FPGA-100.0/TTL_1/full_words.npy | 3 + .../Rhythm_FPGA-100.0/TTL_1/timestamps.npy | 3 + .../Sync_Port-115.0/TTL_1/channel_states.npy | 3 + .../events/Sync_Port-115.0/TTL_1/channels.npy | 3 + .../Sync_Port-115.0/TTL_1/full_words.npy | 3 + .../Sync_Port-115.0/TTL_1/timestamps.npy | 3 + .../BINARY_group_1/channels.npy | 3 + .../BINARY_group_1/data_array.npy | 3 + .../BINARY_group_1/metadata.npy | 3 + .../BINARY_group_1/timestamps.npy | 3 + 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+session_duration: + value: 840.576 + unit: "s" diff --git a/actions/1849-110319-1/data/main.exdir/epochs/exdir.yaml b/actions/1849-110319-1/data/main.exdir/epochs/exdir.yaml new file mode 100755 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/epochs/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/exdir.yaml b/actions/1849-110319-1/data/main.exdir/exdir.yaml new file mode 100755 index 000000000..ed25a9732 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + version: 1 + type: file diff --git a/actions/1849-110319-1/data/main.exdir/general/exdir.yaml b/actions/1849-110319-1/data/main.exdir/general/exdir.yaml new file mode 100755 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/general/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/general/subject/exdir.yaml b/actions/1849-110319-1/data/main.exdir/general/subject/exdir.yaml new file mode 100755 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/general/subject/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/attributes.yaml new file mode 100755 index 000000000..35fb38422 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/attributes.yaml @@ -0,0 +1,30 @@ +spike_sorting: + name: "klusta" + params: + adjacency_radius: "10" + detect_sign: -1 + extract_s_after: 32 + extract_s_before: 16 + file_name: + n_features_per_channel: 3 + num_starting_clusters: 50 + pca_n_waveforms_max: 10000 + probe_file: + threshold_strong_std_factor: 5 + threshold_weak_std_factor: 2 +filter: + hp_filter: + low: 300 + high: 3000 + lfp_filter: + low: 1 + high: 300 + resample: 1000 + mua_filter: + resample: 1000 +reference: + type: "cmr" + split: "half" +sample_rate: + value: 30000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/cluster_nums/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/cluster_nums/attributes.yaml new file mode 100644 index 000000000..196445728 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/cluster_nums/attributes.yaml @@ -0,0 +1 @@ +num_samples: 15 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/cluster_nums/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/cluster_nums/data.npy new file mode 100644 index 000000000..ffff6ff6a --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/cluster_nums/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:6baa053d2dacf531b8d8097dd90d10a82e28c45ae7ea1b09d779a7284d50aa2b +size 188 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/cluster_nums/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/cluster_nums/exdir.yaml new file mode 100644 index 000000000..d1b90af4b --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/cluster_nums/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/exdir.yaml new file mode 100644 index 000000000..ec0339b8f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/nums/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/nums/attributes.yaml new file mode 100644 index 000000000..d867dfd8b --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/nums/attributes.yaml @@ -0,0 +1 @@ +num_samples: 16213 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/nums/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/nums/data.npy new file mode 100644 index 000000000..adaee0949 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/nums/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:01b10f2fe9dd778ca5da5b02b310ccab6fea3e70276307dd8dffbefb7701a4ba +size 129832 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/nums/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/nums/exdir.yaml new file mode 100644 index 000000000..d1b90af4b --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/nums/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/timestamps/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/Clustering/timestamps/attributes.yaml new file mode 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/FeatureExtraction/timestamps/data.npy new file mode 100755 index 000000000..026fd2904 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/FeatureExtraction/timestamps/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a99404a61dc297af24a85792c98ec1643f671dcac3ebc1431e38330e13fbe6a3 +size 422752 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/FeatureExtraction/timestamps/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/FeatureExtraction/timestamps/exdir.yaml new file mode 100755 index 000000000..f586913d9 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/FeatureExtraction/timestamps/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "dataset" + version: 1 diff --git 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_0/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_0/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_0/data/data.npy new file mode 100644 index 000000000..b468ae11a --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_0/data/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:229d6b99ff84b1564bf89c15c7d322781594c88445c291eafe24b7590840fb11 +size 3362432 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_0/data/exdir.yaml 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/attributes.yaml new file mode 100644 index 000000000..7ae3574c8 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 0 +electrode_identity: 1 +num_samples: 840576 +electrode_idx: 1 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/data/data.npy new file mode 100644 index 000000000..c01a82ed2 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/data/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:ccea2fcd4e56f1b957212e09a195c8e9365376ef101aa64e9f798f0e3dc70f1f +size 3362432 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/data/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/data/exdir.yaml new file mode 100644 index 000000000..f7d8c11f9 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_1/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/attributes.yaml new file mode 100644 index 000000000..05253a71e --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 0 +electrode_identity: 2 +num_samples: 840576 +electrode_idx: 2 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/data/data.npy new file mode 100644 index 000000000..7c980c8dd --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/data/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:a2cd1f4ff278bb55466d2beae27fd72bee5630d2b0659bd2663f00275735e11e +size 3362432 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/data/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/data/exdir.yaml new file mode 100644 index 000000000..f7d8c11f9 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_2/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_3/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_3/attributes.yaml new file mode 100644 index 000000000..aea609e55 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_3/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 0 +electrode_identity: 3 +num_samples: 840576 +electrode_idx: 3 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_3/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_3/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_3/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_3/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_3/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_3/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/LFP_timeseries_3/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/exdir.yaml new file mode 100644 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/LFP/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/UnitTimes/52/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/UnitTimes/52/attributes.yaml new file mode 100644 index 000000000..9e8b6c1bc --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/UnitTimes/52/attributes.yaml @@ -0,0 +1,3 @@ +cluster_group: "unsorted" +group_id: "0" +name: "unit #52" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/UnitTimes/52/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/UnitTimes/52/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/UnitTimes/exdir.yaml new file mode 100644 index 000000000..ec0339b8f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/UnitTimes/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/attributes.yaml new file mode 100644 index 000000000..558026677 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_0/attributes.yaml @@ -0,0 +1,20 @@ +electrode_group_id: 0 +electrode_identities: +- 0 +- 1 +- 2 +- 3 +electrode_idx: +- 0 +- 1 +- 2 +- 3 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 30000.0 + unit: "Hz" diff --git 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/Clustering/cluster_nums/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/Clustering/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/Clustering/exdir.yaml new file mode 100644 index 000000000..ec0339b8f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/Clustering/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/Clustering/nums/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/Clustering/nums/attributes.yaml new file mode 100644 index 000000000..54fefadf8 --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/EventWaveform/waveform_timeseries/timestamps/exdir.yaml @@ -0,0 +1,6 @@ +exdir: + type: dataset + version: 1 +plugins: + quantities: + required: true diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/FeatureExtraction/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/FeatureExtraction/attributes.yaml new file mode 100755 index 000000000..f625148ec --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/FeatureExtraction/attributes.yaml @@ -0,0 +1,5 @@ +electrode_idx: +- 3 +- 4 +- 5 +- 6 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/FeatureExtraction/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/FeatureExtraction/data/attributes.yaml new file mode 100755 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/LFP_timeseries_6/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/LFP_timeseries_6/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/LFP_timeseries_6/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/LFP_timeseries_6/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/LFP_timeseries_7/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/LFP_timeseries_7/attributes.yaml new file mode 100644 index 000000000..e3fba9e16 --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/LFP_timeseries_7/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/LFP_timeseries_7/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/LFP_timeseries_7/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/LFP_timeseries_7/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/exdir.yaml new file mode 100644 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/LFP/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/31/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/31/attributes.yaml new file mode 100644 index 000000000..5333e79a4 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/31/attributes.yaml @@ -0,0 +1,3 @@ +cluster_group: "unsorted" +group_id: "1" +name: "unit #31" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/31/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/31/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/41/times/attributes.yaml new file mode 100644 index 000000000..805890c60 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/41/times/attributes.yaml @@ -0,0 +1 @@ +unit: "s" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/41/times/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/41/times/data.npy new file mode 100644 index 000000000..4baa88e75 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/41/times/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c302bebee639c15497abe58e32f5c9353fa1a94e00d4863abc1024f758abadf2 +size 24440 diff --git 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diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/54/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/54/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/54/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/54/times/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/54/times/attributes.yaml new file mode 100644 index 000000000..805890c60 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/54/times/attributes.yaml @@ -0,0 +1 @@ +unit: "s" diff --git 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+ type: dataset + version: 1 +plugins: + quantities: + required: true diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/attributes.yaml new file mode 100644 index 000000000..5b3c060a5 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/attributes.yaml @@ -0,0 +1,3 @@ +cluster_group: "unsorted" +group_id: "1" +name: "unit #59" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/times/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/times/attributes.yaml new file mode 100644 index 000000000..805890c60 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/times/attributes.yaml @@ -0,0 +1 @@ +unit: "s" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/times/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/times/data.npy new file mode 100644 index 000000000..f01776810 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/59/times/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/60/times/attributes.yaml @@ -0,0 +1 @@ +unit: "s" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/60/times/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/60/times/data.npy new file mode 100644 index 000000000..27d728c6b --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/60/times/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d1ffc8ae6ccb0794e1858c6c249369a2e722aeaab68a7e0c1b33a8ed3c3ed03f +size 15480 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/60/times/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/60/times/exdir.yaml new file mode 100644 index 000000000..e4cd26f9a --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/60/times/exdir.yaml @@ -0,0 +1,6 @@ +exdir: + type: dataset + version: 1 +plugins: + quantities: + required: true diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/attributes.yaml new file mode 100644 index 000000000..d01df058e --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/attributes.yaml @@ -0,0 +1,3 @@ +cluster_group: "unsorted" +group_id: "1" +name: "unit #64" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/times/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/times/attributes.yaml new file mode 100644 index 000000000..805890c60 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/times/attributes.yaml @@ -0,0 +1 @@ +unit: "s" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/times/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/64/times/data.npy new file mode 100644 index 000000000..e5dd0d7ce --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/attributes.yaml new file mode 100644 index 000000000..a3968386a --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/attributes.yaml @@ -0,0 +1,3 @@ +cluster_group: "unsorted" +group_id: "1" +name: "unit #66" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/times/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/times/attributes.yaml new file mode 100644 index 000000000..805890c60 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/times/attributes.yaml @@ -0,0 +1 @@ +unit: "s" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/times/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/times/data.npy new file mode 100644 index 000000000..c7e101490 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/UnitTimes/66/times/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f642784589cf46a9db7f08e608b22c101d9725bb007379bba4e4c4fd562d1a78 +size 15696 diff --git 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a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/attributes.yaml new file mode 100644 index 000000000..3d81edfc9 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/attributes.yaml @@ -0,0 +1,20 @@ +electrode_group_id: 1 +electrode_identities: +- 4 +- 5 +- 6 +- 7 +electrode_idx: +- 4 +- 5 +- 6 +- 7 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 30000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_1/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/cluster_nums/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/cluster_nums/attributes.yaml new file mode 100644 index 000000000..196445728 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/cluster_nums/attributes.yaml @@ -0,0 +1 @@ +num_samples: 15 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/cluster_nums/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/cluster_nums/data.npy new file mode 100644 index 000000000..ffff6ff6a --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/cluster_nums/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 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type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/nums/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/nums/attributes.yaml new file mode 100644 index 000000000..acc01b0f7 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/nums/attributes.yaml @@ -0,0 +1 @@ +num_samples: 26213 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/nums/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/nums/data.npy new file mode 100644 index 000000000..9b583546d --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/nums/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:1e67f6dca3a1ac116a4c7dc8761457597f81a0205337c76a445c74c571f4f126 +size 209832 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/nums/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/nums/exdir.yaml new file mode 100644 index 000000000..d1b90af4b --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/nums/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/timestamps/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/timestamps/attributes.yaml new file mode 100644 index 000000000..61303100b --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/timestamps/attributes.yaml @@ -0,0 +1,4 @@ +unit: + value: 1.0 + unit: "s" +num_samples: 26213 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/timestamps/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/timestamps/data.npy new file mode 100644 index 000000000..1aadfdb0d --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/timestamps/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:c57bc53031a18c222cee7bd656d17976b8a7d2f111936e418e53a571d9da59a6 +size 209832 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/timestamps/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/Clustering/timestamps/exdir.yaml new file mode 100644 index 000000000..e4cd26f9a --- /dev/null +++ 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--- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/EventWaveform/waveform_timeseries/attributes.yaml @@ -0,0 +1 @@ +electrode_group_id: "2" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/EventWaveform/waveform_timeseries/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/EventWaveform/waveform_timeseries/data/attributes.yaml new file mode 100644 index 000000000..a02e87d90 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/EventWaveform/waveform_timeseries/data/attributes.yaml @@ -0,0 +1,7 @@ +num_samples: 26213 +sample_rate: + value: 30000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "dimensionless" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/EventWaveform/waveform_timeseries/data/data.npy 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_10/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_10/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_10/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_10/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_11/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_11/attributes.yaml new file mode 100644 index 000000000..5af1acb34 --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_11/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_11/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_11/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_11/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_8/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_8/attributes.yaml new file mode 100755 index 000000000..c42658e8c --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_8/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_8/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_8/exdir.yaml new file mode 100755 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_8/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_9/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_9/attributes.yaml new file mode 100644 index 000000000..3b462538e --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_9/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_9/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_9/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/LFP_timeseries_9/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/exdir.yaml new file mode 100644 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/LFP/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/UnitTimes/46/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/UnitTimes/46/attributes.yaml new file mode 100644 index 000000000..ff75de857 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/UnitTimes/46/attributes.yaml @@ -0,0 +1,3 @@ +cluster_group: "unsorted" +group_id: "2" +name: "unit #46" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/UnitTimes/46/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/UnitTimes/46/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ 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+ type: dataset + version: 1 +plugins: + quantities: + required: true diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/UnitTimes/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/UnitTimes/exdir.yaml new file mode 100644 index 000000000..ec0339b8f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/UnitTimes/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/attributes.yaml new file mode 100644 index 000000000..2ed17c7b0 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/attributes.yaml @@ -0,0 +1,18 @@ +electrode_group_id: 2 +electrode_identities: +- 9 +- 10 +- 11 +electrode_idx: +- 8 +- 9 +- 10 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 30000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_2/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/Clustering/cluster_nums/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/Clustering/cluster_nums/attributes.yaml new file mode 100644 index 000000000..196445728 --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/FeatureExtraction/timestamps/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "dataset" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_12/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_12/attributes.yaml new file mode 100644 index 000000000..bda71642f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_12/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 3 +electrode_identity: 12 +num_samples: 840576 +electrode_idx: 11 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_12/data/attributes.yaml 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_13/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_13/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_13/data/data.npy new file mode 100644 index 000000000..be2ce0370 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_13/data/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:f83542030a25a8c40f7a2d0ac1e7728a6bc1708c14465c29cbb9c5c3b3a4fff3 +size 3362432 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_13/data/exdir.yaml 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_14/attributes.yaml new file mode 100644 index 000000000..bbb3e83b8 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_14/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 3 +electrode_identity: 14 +num_samples: 840576 +electrode_idx: 13 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_14/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_14/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_14/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_14/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_14/data/data.npy new file mode 100644 index 000000000..2f2e4a303 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_14/data/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:484bc8e51ab791c3e3fc582a84c82551072c78b17af4e25022b97317a30054dd +size 3362432 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_14/data/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_14/data/exdir.yaml new file mode 100644 index 000000000..f7d8c11f9 --- 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 3 +electrode_identity: 15 +num_samples: 840576 +electrode_idx: 14 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/data/data.npy new file mode 100644 index 000000000..af55c4455 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/data/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:325a353cc301b0d91655f282a81878ef98978203695c66de93c6adc99b3b919e +size 3362432 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/data/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/data/exdir.yaml new file mode 100644 index 000000000..f7d8c11f9 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/LFP_timeseries_15/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/exdir.yaml new file mode 100644 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/LFP/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/attributes.yaml new file mode 100644 index 000000000..9c0ef0f4c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/attributes.yaml @@ -0,0 +1,3 @@ +cluster_group: "unsorted" +group_id: "3" +name: "unit #35" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/times/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/times/attributes.yaml new file mode 100644 index 000000000..805890c60 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/times/attributes.yaml @@ -0,0 +1 @@ +unit: "s" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/times/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/35/times/data.npy new file mode 100644 index 000000000..da277be00 --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/exdir.yaml new file mode 100644 index 000000000..ec0339b8f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/UnitTimes/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/attributes.yaml new file mode 100644 index 000000000..bd208bc03 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_3/attributes.yaml @@ -0,0 +1,20 @@ +electrode_group_id: 3 +electrode_identities: +- 12 +- 13 +- 14 +- 15 +electrode_idx: +- 11 +- 12 +- 13 +- 14 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 30000.0 + unit: "Hz" diff --git 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value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_17/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_17/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_17/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_17/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_17/data/data.npy new file mode 100644 index 000000000..2b2d9594b --- /dev/null +++ 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value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_18/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_18/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_18/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_18/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_18/data/data.npy new file mode 100644 index 000000000..0725a43e7 --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_18/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_18/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_19/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_19/attributes.yaml new file mode 100644 index 000000000..ac2bca622 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_19/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 4 +electrode_identity: 19 +num_samples: 840576 +electrode_idx: 18 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_19/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_19/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_19/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_19/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_19/data/data.npy new file mode 100644 index 000000000..5b0cdaa2e --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_19/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/LFP_timeseries_19/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/exdir.yaml new file mode 100644 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/LFP/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_4/attributes.yaml new 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_20/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_20/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_20/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_20/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_21/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_21/attributes.yaml new file mode 100644 index 000000000..6da53ba53 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_21/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 5 +electrode_identity: 21 +num_samples: 840576 +electrode_idx: 20 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_21/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_21/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_21/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_21/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_21/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_21/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_21/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_22/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_22/attributes.yaml new file mode 100644 index 000000000..975c554e4 --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_22/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_22/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_22/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_22/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_23/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_23/attributes.yaml new file mode 100644 index 000000000..008362638 --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_23/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_23/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_23/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/LFP_timeseries_23/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/exdir.yaml new file mode 100644 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/LFP/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/16/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/16/attributes.yaml new file mode 100644 index 000000000..82d126ce7 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/16/attributes.yaml @@ -0,0 +1,3 @@ +cluster_group: "unsorted" +group_id: "5" +name: "unit #16" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/16/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/16/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ 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diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/29/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/29/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/29/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/29/times/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/29/times/attributes.yaml new file mode 100644 index 000000000..805890c60 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/29/times/attributes.yaml @@ -0,0 +1 @@ +unit: "s" diff --git 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+ type: dataset + version: 1 +plugins: + quantities: + required: true diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/exdir.yaml new file mode 100644 index 000000000..ec0339b8f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/UnitTimes/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/attributes.yaml new file mode 100644 index 000000000..acecb7965 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/attributes.yaml @@ -0,0 +1,20 @@ +electrode_group_id: 5 +electrode_identities: +- 20 +- 21 +- 22 +- 23 +electrode_idx: +- 19 +- 20 +- 21 +- 22 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 30000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/exdir.yaml new file mode 100644 index 000000000..40c4a431c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_5/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/FeatureExtraction/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/FeatureExtraction/attributes.yaml new file mode 100755 index 000000000..c6abfa964 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/FeatureExtraction/attributes.yaml @@ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_24/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_24/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_25/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_25/attributes.yaml new file mode 100644 index 000000000..372a3f9fe --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_25/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 6 +electrode_identity: 25 +num_samples: 840576 +electrode_idx: 24 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_25/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_25/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_25/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_25/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_25/data/data.npy new file mode 100644 index 000000000..64feb920c --- /dev/null +++ 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value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_26/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_26/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_26/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_26/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_26/data/data.npy new file mode 100644 index 000000000..43f025680 --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_26/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_26/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_27/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_27/attributes.yaml new file mode 100644 index 000000000..42ec88fb4 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_27/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 6 +electrode_identity: 27 +num_samples: 840576 +electrode_idx: 26 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_27/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_27/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_27/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_27/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_6/LFP/LFP_timeseries_27/data/data.npy new file mode 100644 index 000000000..e1fd11bcf --- /dev/null +++ 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/attributes.yaml new file mode 100755 index 000000000..0094db7e9 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/attributes.yaml @@ -0,0 +1,5 @@ +electrode_idx: +- 26 +- 27 +- 28 +- 29 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/data/attributes.yaml new file mode 100755 index 000000000..f04d52023 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/data/attributes.yaml @@ -0,0 +1,4 @@ +num_features: 3 +num_samples: 14539 +num_channels: 4 +feature_type: pca diff --git 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "dataset" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/exdir.yaml new file mode 100755 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/masks/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/FeatureExtraction/masks/data.npy new file mode 100755 index 000000000..d724f93d3 --- /dev/null +++ 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a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/attributes.yaml new file mode 100644 index 000000000..fa742d22e --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 7 +electrode_identity: 28 +num_samples: 840576 +electrode_idx: 27 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/data/data.npy new file mode 100644 index 000000000..de34e030f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/data/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b4589292bfec4dc8120a558088678983efa057d083ba1aab508c99907e1a2c7a +size 3362432 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/data/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/data/exdir.yaml new file mode 100644 index 000000000..f7d8c11f9 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_28/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/attributes.yaml new file mode 100644 index 000000000..1c0bffb09 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 7 +electrode_identity: 29 +num_samples: 840576 +electrode_idx: 28 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/data/data.npy new file mode 100644 index 000000000..d26c556a3 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/data/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:b8f32ab20d0fb9ca02761cf8e0a128a2840360a384cace6ef12626f7c6fed91b +size 3362432 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/data/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_29/data/exdir.yaml new file mode 100644 index 000000000..f7d8c11f9 --- 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b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 7 +electrode_identity: 30 +num_samples: 840576 +electrode_idx: 29 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/data/data.npy new file mode 100644 index 000000000..c0d519193 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/data/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:d904cb62a1e4b049c5bbe040dbee8b16164253475aeacbd80ce18d0839a8c2a2 +size 3362432 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/data/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/data/exdir.yaml new file mode 100644 index 000000000..f7d8c11f9 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_30/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/attributes.yaml new file mode 100644 index 000000000..994d14f8b --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/attributes.yaml @@ -0,0 +1,13 @@ +electrode_group_id: 7 +electrode_identity: 31 +num_samples: 840576 +electrode_idx: 30 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" +sample_rate: + value: 1000.0 + unit: "Hz" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/data/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/data/attributes.yaml new file mode 100644 index 000000000..757bcd44c --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/data/attributes.yaml @@ -0,0 +1,6 @@ +sample_rate: + value: 1000.0 + unit: "Hz" +unit: + value: 1.0 + unit: "uV" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/data/data.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/data/data.npy new file mode 100644 index 000000000..4de1494d0 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/data/data.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:69a94ad665391e618e4b2c804e1f2173cab5463f4b2cc93ad021d58cc715aafc +size 3362432 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/data/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/data/exdir.yaml new file mode 100644 index 000000000..f7d8c11f9 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/data/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: dataset + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/exdir.yaml new file mode 100644 index 000000000..52382672f --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/LFP_timeseries_31/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: group + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/exdir.yaml new file mode 100644 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/LFP/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/attributes.yaml new file mode 100644 index 000000000..aebbb085b --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/attributes.yaml @@ -0,0 +1,17 @@ +electrode_group_id: 7 +electrode_identities: +- 28 +- 29 +- 30 +- 31 +electrode_idx: +- 27 +- 28 +- 29 +- 30 +start_time: + value: 0.0 + unit: "s" +stop_time: + value: 840.576 + unit: "s" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/channel_group_7/exdir.yaml new file mode 100644 index 000000000..52382672f --- 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a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/spikesorting/kilosort2/attributes.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/spikesorting/kilosort2/attributes.yaml new file mode 100644 index 000000000..b81783f28 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/spikesorting/kilosort2/attributes.yaml @@ -0,0 +1,23 @@ +spike_sorting: + name: "kilosort2" + params: + car: false + detect_threshold: 5 + electrode_dimensions: + freq_min: 150 + minFR: 0.1 + nPCs: 3 + sigmaMask: 30 +filter: + hp_filter: + low: 300 + high: 3000 + lfp_filter: + low: 1 + high: 300 + resample: 1000 + mua_filter: + resample: 1000 +reference: + type: "cmr" + split: "half" diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/spikesorting/kilosort2/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/spikesorting/kilosort2/exdir.yaml new file mode 100644 index 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file mode 100644 index 000000000..4331c6053 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/spikesorting/kilosort2/phy/channel_groups.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:2ae06a61f9c1decef2fa3006ebc685a2eb6d4ba063a8d13f7cc2ddd8ec0e4747 +size 376 diff --git a/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/spikesorting/kilosort2/phy/channel_map.npy b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/spikesorting/kilosort2/phy/channel_map.npy new file mode 100644 index 000000000..9fc3df889 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/electrophysiology/spikesorting/kilosort2/phy/channel_map.npy @@ -0,0 +1,3 @@ +version https://git-lfs.github.com/spec/v1 +oid sha256:9a1424652eb3ad65cfb2ea04adab75a39c8a11c0f54592318c4ee4e10eabcf8b +size 376 diff --git 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b/actions/1849-110319-1/data/main.exdir/processing/tracking/camera_0/Position/led_1/timestamps/exdir.yaml new file mode 100644 index 000000000..8232b79cf --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/tracking/camera_0/Position/led_1/timestamps/exdir.yaml @@ -0,0 +1,6 @@ +exdir: + type: dataset + version: 1 +plugins: + quantities: + required: true diff --git a/actions/1849-110319-1/data/main.exdir/processing/tracking/camera_0/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/tracking/camera_0/exdir.yaml new file mode 100755 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/tracking/camera_0/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/data/main.exdir/processing/tracking/exdir.yaml b/actions/1849-110319-1/data/main.exdir/processing/tracking/exdir.yaml new file mode 100755 index 000000000..858635519 --- /dev/null +++ b/actions/1849-110319-1/data/main.exdir/processing/tracking/exdir.yaml @@ -0,0 +1,3 @@ +exdir: + type: "group" + version: 1 diff --git a/actions/1849-110319-1/messages/20190311T093312.yaml b/actions/1849-110319-1/messages/20190311T093312.yaml new file mode 100755 index 000000000..d69522432 --- /dev/null +++ b/actions/1849-110319-1/messages/20190311T093312.yaml @@ -0,0 +1,3 @@ +text: 'bad channels: 3 and 9' +datetime: '2019-03-11T09:33:12' +user: Charlotte diff --git a/actions/1849-110319-1/modules/channel_group_location.yaml b/actions/1849-110319-1/modules/channel_group_location.yaml new file mode 100644 index 000000000..28e852403 --- /dev/null +++ b/actions/1849-110319-1/modules/channel_group_location.yaml @@ -0,0 +1,8 @@ +0: mecl +1: mecl +2: mecl +3: mecl +4: mecr +5: mecr +6: mecr +7: mecr diff --git a/actions/1849-110319-1/modules/depth.yaml b/actions/1849-110319-1/modules/depth.yaml new file mode 100644 index 000000000..15d74fb18 --- /dev/null +++ b/actions/1849-110319-1/modules/depth.yaml @@ -0,0 +1,8 @@ +mecr: + probe_0: + value: '3050' + unit: um +mecl: + probe_0: + value: '3150' + unit: um